README file for the Dynamics data

The columns are tab-separated and are ordered as follows:

Column 1: Protein name.
Column 2: Protein type (it can be a non-hub, singlish-interface hub or multi-interface hub).
Column 3: Interaction IDs of the interactions this protein is involved in. This is the same ID as assigned to each interaction in the interaction data file.
Column 4: This column lists the alternate conformations adopted by that protein and the interactions affected (different conformations are separated by ';'):
First entry is the PDB ID of first alternate conformation followed by the corresponding chain (PDBID_chain).
Second entry (following '|') is  the interaction ID of the interaction which this protein in involved in. This is the same ID as assigned to each interaction in the interaction data file.
Third entry is a number that indicates whether that particular interaction is affected by the protein adopting that alternate conformation (1 indicates that the alternate conformation is conflicting with the interaction, 0 indicates that the alternate conformation is compatible).

We used a relaxed cutoff of 1 Angstrom to define conflicting motion (ie., if any residue from a protein in its alternate conformation was closer than 1 Ang to any other residue from the other protein, the motion was defined to be conflicting. It was compatible if there was no such residue).

Some of the last columns are empty because these proteins did not show any alternate conformations. So, while they interact with other proteins (so the third column is non-empty), there are no multiple conformations for these proteins.