BIOS: fasta.h Source File

00001 
00007 #ifndef DEF_FASTA_H
00008 #define DEF_FASTA_H
00009 
00010 
00011 #include "seq.h"
00012 
00013 
00014 extern void fasta_initFromFile (char *fileName);
00015 extern void fasta_initFromPipe (char *command);
00016 extern void fasta_deInit (void);
00017 extern Seq* fasta_nextSequence (int truncateName);
00018 extern Array fasta_readAllSequences (int truncateName);
00019 extern void fasta_printOneSequence (Seq *currSeq);
00020 extern void fasta_printSequences (Array seqs);
00021 
00022 
00023 #endif